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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015902590.1_cds_XP_016452620.1_46842
CDS Infomation

[gene=LOC107777147] [db_xref=GeneID:107777147] [protein=protein GRIP-like isoform X2] [protein_id=XP_016452620.1] [location=complement(join(33838..33948,34387..34445,34571..34676,34917..34964,35041..35112,36910..36968,37071..37098,37230..37349,37436..37533,37607..37740,38056..38156,38266..38394,39726..39805,40060..40168,40951..41076,41336..41416,41509..41595,44420..44513,45787..45827))] [gbkey=CDS]
Sequence

ATGGATATGGAGAGACAACAGTTACGAAGTACTAACAACAAGCTCAGAGACAACATTGAA
GAGCTGCGCCGTTCTTTGGCACCAAAAGAAATTGCTCTGGAGGCATCACAACAGGCGCTT
TCAGAGAAAGAGCAGAAATTAGAAGAGATGGGAGTATTGCTGCAGGCAGCAGATGAGAAG
AGGCAAGCTTCACTTGATGACCTCTCTTCAAAGCACCAGAAGCAAAGAGAGAGTCTGGAA
GCCCAAATTACTGAGGCATTGGCTGAAAGAAGCAAAGCAACTGAAACAATTTCATCCCTA
CGGGCTCTGATTGCGGAGAAGGAGTCTAAGATTGCAGAGATGGATGCAGCTTCCAGTGGC
GAAGCAGCAAGACTTAGAGCTGCTGTTGAAACTCTAAAAGGAGACATTATTCATCTGAAA
AGTGAACACGAGAAAGAAAAAGATAGTTGGGAAACCACCTGCCATTCACTCAGAACAAAG
CTGGAGATTGCTGAGAGTAACTGCATCCGTGCCGAGATTGAAGTAGCCAAATTTAGAAGT
CAGCTGGAGTCAGAATTATCAGCTCAGTCTCGGGTGTTAAACGCAAAAGAGGCTGAATTA
ATGGCGACCAAAGAAGAGATCAATCGCATTCAAAGTGAATTTTCGTCTTACAAGGCTCGT
GCTCACGCACTTCTTCAGCGAAAGGATGCAGAATTGGCTGCTGCTAGGGACAACGAACAA
CTTAAAGCACTTGAGGAAGCATTGAAGGAGGCTGAGAAAGAGGTAATGTCAGTCTCTTCT
GAAAGGGATAAAGCCCTTGAAGATCTAAAGGACACTTTAGCTAATCATGAGAAGGAACTT
TCAGACAGAGATGAAGCTCTTCGTGCTACAGAGCAACAGATCAGAAGCATGGAAATGAAG
CTCAATTCTGCTTTTTCTGCCCACCAAAAAGAGAAGGAAGCATGGGAAATAAACCTTCAC
AATGTGGAAGAAACATGGCGATTGAGATGTGATGCATTTAAAGCGGAGAGTGTGGTTACC
TCCAGTGATGATGTTCAAAAAGAACTAGAGGACCTCAAACTAAGCTGTAAAAAACTGAAG
GAAGAGCTTGATTCTTTCCGTGACCTTGCTGATAAGATGATTGAGGAGAAGGACAATGAG
ATCTCTAGACTTCTAGATGATAACGAGAACCTTCGCCACAAACTTCAGTCCAAATCCTTT
GCCGATCATTATGGCAATTCCAATGCAGTGTATGACAAGCAGGATGCTCCAAATTCGACT
ACCTCAGCTGCTGAACAACAGATTCTAGTTTTGGCAAGGCAGCAAGCGCAAAGAGAAGAA
GAGCTTTCTCAGTCACAACGTCACATTCTCGCACTTCAAGAGGAGATAGAAGAGCTCGAG
CGTGAAAATCGTCTCCACAACCAGCAGGTAGCTAAGTTGAAAGAAGAGCTAAGAAACATG
GATAGATCACAGAAGAGGGAAGGGGTAGATATGACGTATCTTAAGAATGTCATTTTAAAA
CTTCTCGAGACAGGTGAAGTAGAGGCTCTGTTACCTGTGGTTGCAATGCTTCTCCAGTTC
AGTCCTGAGGAGATGCGGAAGTGCCAACAAGCATATCGCTCCTCTATAGAAGCTCAAGCC
AGCCCTGCAAAAGATACTTCAGGATCTGGGACTTCACTGTTTTCTAGATTCTCATTCTCT
TAA

Peptide Sequence

PEP ID

XP_016452620.1
PEP Infomation

PREDICTED: protein GRIP-like isoform X2 [Nicotiana tabacum]
Sequence

MDMERQQLRSTNNKLRDNIEELRRSLAPKEIALEASQQALSEKEQKLEEMGVLLQAADEK
RQASLDDLSSKHQKQRESLEAQITEALAERSKATETISSLRALIAEKESKIAEMDAASSG
EAARLRAAVETLKGDIIHLKSEHEKEKDSWETTCHSLRTKLEIAESNCIRAEIEVAKFRS
QLESELSAQSRVLNAKEAELMATKEEINRIQSEFSSYKARAHALLQRKDAELAAARDNEQ
LKALEEALKEAEKEVMSVSSERDKALEDLKDTLANHEKELSDRDEALRATEQQIRSMEMK
LNSAFSAHQKEKEAWEINLHNVEETWRLRCDAFKAESVVTSSDDVQKELEDLKLSCKKLK
EELDSFRDLADKMIEEKDNEISRLLDDNENLRHKLQSKSFADHYGNSNAVYDKQDAPNST
TSAAEQQILVLARQQAQREEELSQSQRHILALQEEIEELERENRLHNQQVAKLKEELRNM
DRSQKREGVDMTYLKNVILKLLETGEVEALLPVVAMLLQFSPEEMRKCQQAYRSSIEAQA
SPAKDTSGSGTSLFSRFSFS

Transcript Sequence

Gene sequence data has not been registered.